UCSCXenaShiny: Interactive Analysis of UCSC Xena Data

Provides functions and a Shiny application for downloading, analyzing and visualizing datasets from UCSC Xena (<http://xena.ucsc.edu/>), which is a collection of UCSC-hosted public databases such as TCGA, ICGC, TARGET, GTEx, CCLE, and others.

Version: 1.0.0
Depends: R (≥ 3.5)
Imports: dplyr (≥ 0.8.3), ezcox, forcats, ggplot2 (≥ 3.2.0), ggpubr (≥ 0.2), magrittr (≥ 1.5), ppcor, psych, purrr, shiny (≥ 1.3.2), stats, stringr, tibble (≥ 2.1.3), tidyr, UCSCXenaTools, utils
Suggests: covr (≥ 3.2.1), cowplot, DT (≥ 0.5), furrr, future, ggrepel, ggstatsplot, knitr, pacman, plotly, plyr, RColorBrewer (≥ 1.1.2), rmarkdown, scales, survival, survminer, testthat (≥ 2.0.1)
Published: 2021-05-16
Author: Shixiang Wang ORCID iD [aut, cre], Yi Xiong ORCID iD [aut], Longfei Zhao ORCID iD [aut], Kai Gu ORCID iD [aut], Yin Li [aut], Fei Zhao [aut]
Maintainer: Shixiang Wang <w_shixiang at 163.com>
BugReports: https://github.com/openbiox/UCSCXenaShiny/issues
License: MIT + file LICENSE
URL: https://github.com/openbiox/UCSCXenaShiny
NeedsCompilation: no
Materials: README NEWS
CRAN checks: UCSCXenaShiny results


Reference manual: UCSCXenaShiny.pdf
Vignettes: Accessible Functions
Package source: UCSCXenaShiny_1.0.0.tar.gz
Windows binaries: r-devel: UCSCXenaShiny_1.0.0.zip, r-release: UCSCXenaShiny_1.0.0.zip, r-oldrel: UCSCXenaShiny_1.0.0.zip
macOS binaries: r-release (arm64): UCSCXenaShiny_1.0.0.tgz, r-release (x86_64): UCSCXenaShiny_1.0.0.tgz, r-oldrel: UCSCXenaShiny_1.0.0.tgz
Old sources: UCSCXenaShiny archive


Please use the canonical form https://CRAN.R-project.org/package=UCSCXenaShiny to link to this page.