CRAN Package Check Results for Package rbiom

Last updated on 2021-12-04 23:50:42 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0.3 56.87 52.47 109.34 OK
r-devel-linux-x86_64-debian-gcc 1.0.3 42.09 41.71 83.80 OK
r-devel-linux-x86_64-fedora-clang 1.0.3 157.38 OK
r-devel-linux-x86_64-fedora-gcc 1.0.3 132.25 OK
r-devel-windows-x86_64-new-UL 1.0.3 76.00 0.00 76.00 FAIL
r-devel-windows-x86_64-new-TK 1.0.3 OK
r-devel-windows-x86_64-old 1.0.3 72.00 111.00 183.00 OK
r-patched-linux-x86_64 1.0.3 50.19 42.92 93.11 OK
r-release-linux-x86_64 1.0.3 45.49 43.28 88.77 OK
r-release-macos-arm64 1.0.3 OK
r-release-macos-x86_64 1.0.3 OK
r-release-windows-ix86+x86_64 1.0.3 142.00 164.00 306.00 OK
r-oldrel-macos-x86_64 1.0.3 OK
r-oldrel-windows-ix86+x86_64 1.0.3 139.00 171.00 310.00 OK

Check Details

Version: 1.0.3
Check: examples
Result: FAIL
    Check process probably crashed or hung up for 20 minutes ... killed
    Most likely this happened in the example checks (?),
    if not, ignore the following last lines of example output:
    >
    > infile <- system.file("extdata", "hmp50.bz2", package = "rbiom")
    > biom <- read.biom(infile)
    > range(slam::col_sums(biom$counts))
    [1] 182 22117
    >
    > biom <- rarefy(biom, depth=1000)
    > range(slam::col_sums(biom$counts))
    [1] 1000 1000
    >
    >
    >
    >
    > cleanEx()
    > nameEx("read.biom")
    > ### * read.biom
    >
    > flush(stderr()); flush(stdout())
    >
    > ### Name: read.biom
    > ### Title: Extracts counts, metadata, taxonomy, and phylogeny from a biom
    > ### file.
    > ### Aliases: read.biom
    >
    > ### ** Examples
    >
    > library(rbiom)
    >
    > infile <- system.file("extdata", "hmp50.bz2", package = "rbiom")
    > biom <- read.biom(infile)
    ======== End of example output (where/before crash/hang up occured ?) ========
Flavor: r-devel-windows-x86_64-new-UL