CRAN Package Check Results for Package SpaDES.core

Last updated on 2021-07-28 23:51:21 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0.8 OK
r-devel-linux-x86_64-debian-gcc 1.0.8 32.87 256.89 289.76 OK
r-devel-linux-x86_64-fedora-clang 1.0.8 472.63 OK
r-devel-linux-x86_64-fedora-gcc 1.0.8 468.55 OK
r-devel-windows-x86_64 1.0.8 45.00 381.00 426.00 OK
r-devel-windows-x86_64-gcc10-UCRT 1.0.8 OK
r-patched-linux-x86_64 1.0.8 46.86 324.35 371.21 OK
r-patched-solaris-x86 1.0.8 570.10 WARN
r-release-linux-x86_64 1.0.8 36.66 324.78 361.44 OK
r-release-macos-arm64 1.0.8 OK
r-release-macos-x86_64 1.0.8 WARN
r-release-windows-ix86+x86_64 1.0.8 87.00 382.00 469.00 OK
r-oldrel-macos-x86_64 1.0.8 WARN
r-oldrel-windows-ix86+x86_64 1.0.8 47.00 384.00 431.00 OK

Check Details

Version: 1.0.8
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘i-introduction.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
    --- finished re-building ‘i-introduction.Rmd’
    
    --- re-building ‘ii-modules.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
    
    Attaching package: 'magrittr'
    
    The following object is masked from 'package:raster':
    
     extract
    
    Setting:
     options(
     spades.modulePath = '/home/ripley/R/Lib32/SpaDES.core/sampleModules'
     )
    Paths set to:
     options(
     rasterTmpDir = '/tmp/RtmpkUa45U/working_dir/Rtmpc4aqgV/raster'
     reproducible.cachePath = '/tmp/RtmpkUa45U/working_dir/Rtmpc4aqgV/Require/cache'
     spades.inputPath = '/tmp/RtmpkPaOXN/SpaDES/inputs'
     spades.outputPath = '/tmp/RtmpkPaOXN/SpaDES/outputs'
     spades.modulePath = '/home/ripley/R/Lib32/SpaDES.core/sampleModules'
     )
    Jul25 17:04:23 chckpn total elpsd: 0.011 secs | 0 checkpoint init 0
    Jul25 17:04:23 save total elpsd: 0.026 secs | 0 save init 0
    Jul25 17:04:23 prgrss total elpsd: 0.034 secs | 0 progress init 0
    Jul25 17:04:23 load total elpsd: 0.042 secs | 0 load init 0
    Jul25 17:04:23 rndmLn total elpsd: 0.049 secs | 0 randomLandscapes init
    Jul25 17:04:24 frSprd total elpsd: 0.92 secs | 0 fireSpread init 1
    Jul25 17:04:24 crbMvm total elpsd: 0.95 secs | 0 caribouMovement init 1
    Jul25 17:04:24 frSprd total elpsd: 0.98 secs | 0 fireSpread burn 5
    Jul25 17:04:24 frSprd total elpsd: 1.2 secs | 0 fireSpread stats 5
    Jul25 17:04:24 rndmLn total elpsd: 1.2 secs | 0 randomLandscapes plot 1
    Jul25 17:04:24 frSprd total elpsd: 1.6 secs | 0 fireSpread plot.init 10
    Jul25 17:04:25 crbMvm total elpsd: 1.8 secs | 0.08333 caribouMovement p
    Jul25 17:04:25 crbMvm total elpsd: 2 secs | 0.1667 caribouMovement plot
    Jul25 17:04:25 crbMvm total elpsd: 2.2 secs | 0.25 caribouMovement plot
    Jul25 17:04:25 crbMvm total elpsd: 2.4 secs | 0.3333 caribouMovement pl
    Jul25 17:04:25 crbMvm total elpsd: 2.6 secs | 0.4167 caribouMovement pl
    Jul25 17:04:26 crbMvm total elpsd: 2.8 secs | 0.5 caribouMovement plot
    Jul25 17:04:26 crbMvm total elpsd: 3 secs | 0.5833 caribouMovement plot
    Jul25 17:04:26 crbMvm total elpsd: 3.1 secs | 0.6667 caribouMovement pl
    Jul25 17:04:26 crbMvm total elpsd: 3.3 secs | 0.75 caribouMovement plot
    Jul25 17:04:26 crbMvm total elpsd: 3.5 secs | 0.8333 caribouMovement pl
    Jul25 17:04:26 crbMvm total elpsd: 3.7 secs | 0.9167 caribouMovement pl
    Jul25 17:04:27 crbMvm total elpsd: 3.9 secs | 1 caribouMovement move 5
    Jul25 17:04:27 frSprd total elpsd: 3.9 secs | 1 fireSpread burn 5
    Jul25 17:04:27 frSprd total elpsd: 4 secs | 1 fireSpread stats 5
    Jul25 17:04:27 crbMvm total elpsd: 4 secs | 1 caribouMovement plot 10
    Jul25 17:04:27 crbMvm total elpsd: 4.3 secs | 1.083 caribouMovement mov
    Jul25 17:04:27 crbMvm total elpsd: 4.3 secs | 1.083 caribouMovement plo
    Jul25 17:04:27 crbMvm total elpsd: 4.5 secs | 1.167 caribouMovement mov
    Jul25 17:04:27 crbMvm total elpsd: 4.5 secs | 1.167 caribouMovement plo
    Jul25 17:04:27 crbMvm total elpsd: 4.7 secs | 1.25 caribouMovement move
    Jul25 17:04:28 crbMvm total elpsd: 4.7 secs | 1.25 caribouMovement plot
    Jul25 17:04:28 crbMvm total elpsd: 4.9 secs | 1.333 caribouMovement mov
    Jul25 17:04:28 crbMvm total elpsd: 4.9 secs | 1.333 caribouMovement plo
    Jul25 17:04:28 crbMvm total elpsd: 5.1 secs | 1.417 caribouMovement mov
    Jul25 17:04:28 crbMvm total elpsd: 5.1 secs | 1.417 caribouMovement plo
    Jul25 17:04:28 crbMvm total elpsd: 5.3 secs | 1.5 caribouMovement move
    Jul25 17:04:28 crbMvm total elpsd: 5.4 secs | 1.5 caribouMovement plot
    Jul25 17:04:28 crbMvm total elpsd: 5.5 secs | 1.583 caribouMovement mov
    Jul25 17:04:28 crbMvm total elpsd: 5.6 secs | 1.583 caribouMovement plo
    Jul25 17:04:29 crbMvm total elpsd: 5.8 secs | 1.667 caribouMovement mov
    Jul25 17:04:29 crbMvm total elpsd: 5.8 secs | 1.667 caribouMovement plo
    Jul25 17:04:29 crbMvm total elpsd: 6 secs | 1.75 caribouMovement move 5
    Jul25 17:04:29 crbMvm total elpsd: 6 secs | 1.75 caribouMovement plot 1
    Jul25 17:04:29 crbMvm total elpsd: 6.2 secs | 1.833 caribouMovement mov
    Jul25 17:04:29 crbMvm total elpsd: 6.2 secs | 1.833 caribouMovement plo
    Jul25 17:04:29 crbMvm total elpsd: 6.4 secs | 1.917 caribouMovement mov
    Jul25 17:04:29 crbMvm total elpsd: 6.4 secs | 1.917 caribouMovement plo
    Jul25 17:04:29 frSprd total elpsd: 6.6 secs | 2 fireSpread burn 5
    Jul25 17:04:29 crbMvm total elpsd: 6.6 secs | 2 caribouMovement move 5
    Jul25 17:04:29 frSprd total elpsd: 6.7 secs | 2 fireSpread stats 5
    Jul25 17:04:29 crbMvm total elpsd: 6.7 secs | 2 caribouMovement plot 10
    simList saved in
     SpaDES.core:::.pkgEnv$.sim
    It will be deleted at next spades() call.
    Quitting from lines 389-391 (ii-modules.Rmd)
    Error: processing vignette 'ii-modules.Rmd' failed with diagnostics:
    there is no package called 'webshot'
    --- failed re-building ‘ii-modules.Rmd’
    
    --- re-building ‘iii-cache.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
    
    Attaching package: 'raster'
    
    The following object is masked from 'package:magrittr':
    
     extract
    
    Loading required package: quickPlot
    
    Attaching package: 'SpaDES.core'
    
    The following objects are masked from 'package:stats':
    
     end, start
    
    The following object is masked from 'package:utils':
    
     citation
    
    Setting:
     options(
     spades.modulePath = '/home/ripley/R/Lib32/SpaDES.core/sampleModules'
     )
    Paths set to:
     options(
     rasterTmpDir = '/tmp/RtmpkUa45U/working_dir/RtmpIBa4vW/raster'
     reproducible.cachePath = '/tmp/RtmpkUa45U/working_dir/RtmpIBa4vW/Require/cache'
     spades.inputPath = '/tmp/RtmpkPaOXN/SpaDES/inputs'
     spades.outputPath = '/tmp/RtmpkPaOXN/SpaDES/outputs'
     spades.modulePath = '/home/ripley/R/Lib32/SpaDES.core/sampleModules'
     )
    Loading required package: RColorBrewer
    --- finished re-building ‘iii-cache.Rmd’
    
    --- re-building ‘iv-advanced.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
    --- finished re-building ‘iv-advanced.Rmd’
    
    --- re-building ‘v-automated-testing.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
    --- finished re-building ‘v-automated-testing.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘ii-modules.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-patched-solaris-x86

Version: 1.0.8
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building ‘i-introduction.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
    --- finished re-building ‘i-introduction.Rmd’
    
    --- re-building ‘ii-modules.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
    
    Attaching package: 'magrittr'
    
    The following object is masked from 'package:raster':
    
     extract
    
    Setting:
     options(
     spades.modulePath = '/Volumes/Builds/packages/high-sierra-x86_64/results/4.1/SpaDES.core.Rcheck/SpaDES.core/sampleModules'
     )
    Paths set to:
     options(
     rasterTmpDir = '/Volumes/Temp/tmp/Rtmp4drKP3/raster'
     reproducible.cachePath = '/Volumes/Temp/tmp/Rtmp4drKP3/Require/cache'
     spades.inputPath = '/Volumes/Temp/tmp/Rtmp3kUDwQ/SpaDES/inputs'
     spades.outputPath = '/Volumes/Temp/tmp/Rtmp3kUDwQ/SpaDES/outputs'
     spades.modulePath = '/Volumes/Builds/packages/high-sierra-x86_64/results/4.1/SpaDES.core.Rcheck/SpaDES.core/sampleModules'
     )
    Jun11 08:59:57 chckpn total elpsd: 0.0026 secs | 0 checkpoint init 0
    Jun11 08:59:57 save total elpsd: 0.0062 secs | 0 save init 0
    Jun11 08:59:57 prgrss total elpsd: 0.0081 secs | 0 progress init 0
    Jun11 08:59:57 load total elpsd: 0.0099 secs | 0 load init 0
    Jun11 08:59:57 rndmLn total elpsd: 0.011 secs | 0 randomLandscapes init
    Jun11 08:59:57 frSprd total elpsd: 0.24 secs | 0 fireSpread init 1
    Jun11 08:59:57 crbMvm total elpsd: 0.25 secs | 0 caribouMovement init 1
    Jun11 08:59:57 frSprd total elpsd: 0.26 secs | 0 fireSpread burn 5
    Jun11 08:59:57 frSprd total elpsd: 0.3 secs | 0 fireSpread stats 5
    Jun11 08:59:57 rndmLn total elpsd: 0.31 secs | 0 randomLandscapes plot
    Jun11 08:59:57 frSprd total elpsd: 0.41 secs | 0 fireSpread plot.init 1
    Jun11 08:59:57 crbMvm total elpsd: 0.54 secs | 0.08333 caribouMovement
    Jun11 08:59:57 crbMvm total elpsd: 0.58 secs | 0.1667 caribouMovement p
    Jun11 08:59:57 crbMvm total elpsd: 0.63 secs | 0.25 caribouMovement plo
    Jun11 08:59:57 crbMvm total elpsd: 0.68 secs | 0.3333 caribouMovement p
    Jun11 08:59:57 crbMvm total elpsd: 0.73 secs | 0.4167 caribouMovement p
    Jun11 08:59:57 crbMvm total elpsd: 0.79 secs | 0.5 caribouMovement plot
    Jun11 08:59:57 crbMvm total elpsd: 0.84 secs | 0.5833 caribouMovement p
    Jun11 08:59:58 crbMvm total elpsd: 0.89 secs | 0.6667 caribouMovement p
    Jun11 08:59:58 crbMvm total elpsd: 0.94 secs | 0.75 caribouMovement plo
    Jun11 08:59:58 crbMvm total elpsd: 0.98 secs | 0.8333 caribouMovement p
    Jun11 08:59:58 crbMvm total elpsd: 1 secs | 0.9167 caribouMovement plot
    Jun11 08:59:58 crbMvm total elpsd: 1.1 secs | 1 caribouMovement move 5
    Jun11 08:59:58 frSprd total elpsd: 1.1 secs | 1 fireSpread burn 5
    Jun11 08:59:58 frSprd total elpsd: 1.1 secs | 1 fireSpread stats 5
    Jun11 08:59:58 crbMvm total elpsd: 1.1 secs | 1 caribouMovement plot 10
    Jun11 08:59:58 crbMvm total elpsd: 1.2 secs | 1.083 caribouMovement mov
    Jun11 08:59:58 crbMvm total elpsd: 1.2 secs | 1.083 caribouMovement plo
    Jun11 08:59:58 crbMvm total elpsd: 1.2 secs | 1.167 caribouMovement mov
    Jun11 08:59:58 crbMvm total elpsd: 1.3 secs | 1.167 caribouMovement plo
    Jun11 08:59:58 crbMvm total elpsd: 1.3 secs | 1.25 caribouMovement move
    Jun11 08:59:58 crbMvm total elpsd: 1.3 secs | 1.25 caribouMovement plot
    Jun11 08:59:58 crbMvm total elpsd: 1.4 secs | 1.333 caribouMovement mov
    Jun11 08:59:58 crbMvm total elpsd: 1.4 secs | 1.333 caribouMovement plo
    Jun11 08:59:58 crbMvm total elpsd: 1.4 secs | 1.417 caribouMovement mov
    Jun11 08:59:58 crbMvm total elpsd: 1.4 secs | 1.417 caribouMovement plo
    Jun11 08:59:58 crbMvm total elpsd: 1.5 secs | 1.5 caribouMovement move
    Jun11 08:59:58 crbMvm total elpsd: 1.5 secs | 1.5 caribouMovement plot
    Jun11 08:59:58 crbMvm total elpsd: 1.5 secs | 1.583 caribouMovement mov
    Jun11 08:59:58 crbMvm total elpsd: 1.5 secs | 1.583 caribouMovement plo
    Jun11 08:59:58 crbMvm total elpsd: 1.6 secs | 1.667 caribouMovement mov
    Jun11 08:59:58 crbMvm total elpsd: 1.6 secs | 1.667 caribouMovement plo
    Jun11 08:59:58 crbMvm total elpsd: 1.7 secs | 1.75 caribouMovement move
    Jun11 08:59:58 crbMvm total elpsd: 1.7 secs | 1.75 caribouMovement plot
    Jun11 08:59:58 crbMvm total elpsd: 1.7 secs | 1.833 caribouMovement mov
    Jun11 08:59:58 crbMvm total elpsd: 1.7 secs | 1.833 caribouMovement plo
    Jun11 08:59:58 crbMvm total elpsd: 1.8 secs | 1.917 caribouMovement mov
    Jun11 08:59:58 crbMvm total elpsd: 1.8 secs | 1.917 caribouMovement plo
    Jun11 08:59:58 frSprd total elpsd: 1.8 secs | 2 fireSpread burn 5
    Jun11 08:59:58 crbMvm total elpsd: 1.8 secs | 2 caribouMovement move 5
    Jun11 08:59:58 frSprd total elpsd: 1.9 secs | 2 fireSpread stats 5
    Jun11 08:59:58 crbMvm total elpsd: 1.9 secs | 2 caribouMovement plot 10
    simList saved in
     SpaDES.core:::.pkgEnv$.sim
    It will be deleted at next spades() call.
    Quitting from lines 389-391 (ii-modules.Rmd)
    Error: processing vignette 'ii-modules.Rmd' failed with diagnostics:
    invalid 'path' argument
    --- failed re-building ‘ii-modules.Rmd’
    
    --- re-building ‘iii-cache.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
    
    Attaching package: 'raster'
    
    The following object is masked from 'package:magrittr':
    
     extract
    
    Loading required package: quickPlot
    
    Attaching package: 'SpaDES.core'
    
    The following objects are masked from 'package:stats':
    
     end, start
    
    The following object is masked from 'package:utils':
    
     citation
    
    Setting:
     options(
     spades.modulePath = '/Volumes/Builds/packages/high-sierra-x86_64/results/4.1/SpaDES.core.Rcheck/SpaDES.core/sampleModules'
     )
    Paths set to:
     options(
     rasterTmpDir = '/Volumes/Temp/tmp/Rtmp81Ydqi/raster'
     reproducible.cachePath = '/Volumes/Temp/tmp/Rtmp81Ydqi/Require/cache'
     spades.inputPath = '/Volumes/Temp/tmp/Rtmp3kUDwQ/SpaDES/inputs'
     spades.outputPath = '/Volumes/Temp/tmp/Rtmp3kUDwQ/SpaDES/outputs'
     spades.modulePath = '/Volumes/Builds/packages/high-sierra-x86_64/results/4.1/SpaDES.core.Rcheck/SpaDES.core/sampleModules'
     )
    Loading required package: RColorBrewer
    --- finished re-building ‘iii-cache.Rmd’
    
    --- re-building ‘iv-advanced.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
    --- finished re-building ‘iv-advanced.Rmd’
    
    --- re-building ‘v-automated-testing.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
    --- finished re-building ‘v-automated-testing.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘ii-modules.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-release-macos-x86_64

Version: 1.0.8
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building ‘i-introduction.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
    --- finished re-building ‘i-introduction.Rmd’
    
    --- re-building ‘ii-modules.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
    
    Attaching package: 'magrittr'
    
    The following object is masked from 'package:raster':
    
     extract
    
    Setting:
     options(
     spades.modulePath = '/Volumes/Builds/packages/high-sierra-x86_64/results/4.0/SpaDES.core.Rcheck/SpaDES.core/sampleModules'
     )
    Paths set to:
     options(
     rasterTmpDir = '/Volumes/Temp/tmp/Rtmp6COeYq/raster'
     reproducible.cachePath = '/Volumes/Temp/tmp/Rtmp6COeYq/Require/cache'
     spades.inputPath = '/Volumes/Temp/tmp/RtmpjOO11B/SpaDES/inputs'
     spades.outputPath = '/Volumes/Temp/tmp/RtmpjOO11B/SpaDES/outputs'
     spades.modulePath = '/Volumes/Builds/packages/high-sierra-x86_64/results/4.0/SpaDES.core.Rcheck/SpaDES.core/sampleModules'
     )
    Jun11 07:56:13 chckpn total elpsd: 0.0021 secs | 0 checkpoint init 0
    Jun11 07:56:13 save total elpsd: 0.0058 secs | 0 save init 0
    Jun11 07:56:13 prgrss total elpsd: 0.0082 secs | 0 progress init 0
    Jun11 07:56:13 load total elpsd: 0.01 secs | 0 load init 0
    Jun11 07:56:13 rndmLn total elpsd: 0.012 secs | 0 randomLandscapes init
    Jun11 07:56:14 frSprd total elpsd: 0.23 secs | 0 fireSpread init 1
    Jun11 07:56:14 crbMvm total elpsd: 0.24 secs | 0 caribouMovement init 1
    Jun11 07:56:14 frSprd total elpsd: 0.25 secs | 0 fireSpread burn 5
    Jun11 07:56:14 frSprd total elpsd: 0.3 secs | 0 fireSpread stats 5
    Jun11 07:56:14 rndmLn total elpsd: 0.31 secs | 0 randomLandscapes plot
    Jun11 07:56:14 frSprd total elpsd: 0.41 secs | 0 fireSpread plot.init 1
    Jun11 07:56:14 crbMvm total elpsd: 0.52 secs | 0.08333 caribouMovement
    Jun11 07:56:14 crbMvm total elpsd: 0.57 secs | 0.1667 caribouMovement p
    Jun11 07:56:14 crbMvm total elpsd: 0.64 secs | 0.25 caribouMovement plo
    Jun11 07:56:14 crbMvm total elpsd: 0.7 secs | 0.3333 caribouMovement pl
    Jun11 07:56:14 crbMvm total elpsd: 0.77 secs | 0.4167 caribouMovement p
    Jun11 07:56:14 crbMvm total elpsd: 0.83 secs | 0.5 caribouMovement plot
    Jun11 07:56:14 crbMvm total elpsd: 0.9 secs | 0.5833 caribouMovement pl
    Jun11 07:56:14 crbMvm total elpsd: 0.97 secs | 0.6667 caribouMovement p
    Jun11 07:56:14 crbMvm total elpsd: 1 secs | 0.75 caribouMovement plot 1
    Jun11 07:56:15 crbMvm total elpsd: 1.1 secs | 0.8333 caribouMovement pl
    Jun11 07:56:15 crbMvm total elpsd: 1.2 secs | 0.9167 caribouMovement pl
    Jun11 07:56:15 crbMvm total elpsd: 1.2 secs | 1 caribouMovement move 5
    Jun11 07:56:15 frSprd total elpsd: 1.3 secs | 1 fireSpread burn 5
    Jun11 07:56:15 frSprd total elpsd: 1.3 secs | 1 fireSpread stats 5
    Jun11 07:56:15 crbMvm total elpsd: 1.3 secs | 1 caribouMovement plot 10
    Jun11 07:56:15 crbMvm total elpsd: 1.3 secs | 1.083 caribouMovement mov
    Jun11 07:56:15 crbMvm total elpsd: 1.4 secs | 1.083 caribouMovement plo
    Jun11 07:56:15 crbMvm total elpsd: 1.4 secs | 1.167 caribouMovement mov
    Jun11 07:56:15 crbMvm total elpsd: 1.4 secs | 1.167 caribouMovement plo
    Jun11 07:56:15 crbMvm total elpsd: 1.5 secs | 1.25 caribouMovement move
    Jun11 07:56:15 crbMvm total elpsd: 1.5 secs | 1.25 caribouMovement plot
    Jun11 07:56:15 crbMvm total elpsd: 1.6 secs | 1.333 caribouMovement mov
    Jun11 07:56:15 crbMvm total elpsd: 1.6 secs | 1.333 caribouMovement plo
    Jun11 07:56:15 crbMvm total elpsd: 1.6 secs | 1.417 caribouMovement mov
    Jun11 07:56:15 crbMvm total elpsd: 1.7 secs | 1.417 caribouMovement plo
    Jun11 07:56:15 crbMvm total elpsd: 1.7 secs | 1.5 caribouMovement move
    Jun11 07:56:15 crbMvm total elpsd: 1.7 secs | 1.5 caribouMovement plot
    Jun11 07:56:15 crbMvm total elpsd: 1.8 secs | 1.583 caribouMovement mov
    Jun11 07:56:15 crbMvm total elpsd: 1.8 secs | 1.583 caribouMovement plo
    Jun11 07:56:15 crbMvm total elpsd: 1.9 secs | 1.667 caribouMovement mov
    Jun11 07:56:15 crbMvm total elpsd: 1.9 secs | 1.667 caribouMovement plo
    Jun11 07:56:15 crbMvm total elpsd: 2 secs | 1.75 caribouMovement move 5
    Jun11 07:56:15 crbMvm total elpsd: 2 secs | 1.75 caribouMovement plot 1
    Jun11 07:56:15 crbMvm total elpsd: 2 secs | 1.833 caribouMovement move
    Jun11 07:56:15 crbMvm total elpsd: 2 secs | 1.833 caribouMovement plot
    Jun11 07:56:16 crbMvm total elpsd: 2.1 secs | 1.917 caribouMovement mov
    Jun11 07:56:16 crbMvm total elpsd: 2.1 secs | 1.917 caribouMovement plo
    Jun11 07:56:16 frSprd total elpsd: 2.2 secs | 2 fireSpread burn 5
    Jun11 07:56:16 crbMvm total elpsd: 2.2 secs | 2 caribouMovement move 5
    Jun11 07:56:16 frSprd total elpsd: 2.2 secs | 2 fireSpread stats 5
    Jun11 07:56:16 crbMvm total elpsd: 2.2 secs | 2 caribouMovement plot 10
    simList saved in
     SpaDES.core:::.pkgEnv$.sim
    It will be deleted at next spades() call.
    Quitting from lines 389-391 (ii-modules.Rmd)
    Error: processing vignette 'ii-modules.Rmd' failed with diagnostics:
    invalid 'path' argument
    --- failed re-building ‘ii-modules.Rmd’
    
    --- re-building ‘iii-cache.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
    
    Attaching package: 'raster'
    
    The following object is masked from 'package:magrittr':
    
     extract
    
    Loading required package: quickPlot
    
    Attaching package: 'SpaDES.core'
    
    The following objects are masked from 'package:stats':
    
     end, start
    
    The following object is masked from 'package:utils':
    
     citation
    
    Setting:
     options(
     spades.modulePath = '/Volumes/Builds/packages/high-sierra-x86_64/results/4.0/SpaDES.core.Rcheck/SpaDES.core/sampleModules'
     )
    Paths set to:
     options(
     rasterTmpDir = '/Volumes/Temp/tmp/RtmpLNlFgC/raster'
     reproducible.cachePath = '/Volumes/Temp/tmp/RtmpLNlFgC/Require/cache'
     spades.inputPath = '/Volumes/Temp/tmp/RtmpjOO11B/SpaDES/inputs'
     spades.outputPath = '/Volumes/Temp/tmp/RtmpjOO11B/SpaDES/outputs'
     spades.modulePath = '/Volumes/Builds/packages/high-sierra-x86_64/results/4.0/SpaDES.core.Rcheck/SpaDES.core/sampleModules'
     )
    Loading required package: RColorBrewer
    --- finished re-building ‘iii-cache.Rmd’
    
    --- re-building ‘iv-advanced.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
    --- finished re-building ‘iv-advanced.Rmd’
    
    --- re-building ‘v-automated-testing.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
    --- finished re-building ‘v-automated-testing.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘ii-modules.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-oldrel-macos-x86_64