tidycwl: Tidy Common Workflow Language Tools and Workflows

The Common Workflow Language <https://www.commonwl.org/> is an open standard for describing data analysis workflows. This package takes the raw Common Workflow Language workflows encoded in JSON or 'YAML' and turns the workflow elements into tidy data frames or lists. A graph representation for the workflow can be constructed and visualized with the parsed workflow inputs, outputs, and steps. Users can embed the visualizations in their 'Shiny' applications, and export them as HTML files or static images.

Version: 1.0.7
Imports: jsonlite, yaml, dplyr, magrittr, visNetwork, htmlwidgets, webshot
Suggests: knitr, rmarkdown, shiny
Published: 2022-05-03
DOI: 10.32614/CRAN.package.tidycwl
Author: Soner Koc ORCID iD [aut, cre], Jeffrey Grover ORCID iD [aut], Nan Xiao ORCID iD [aut], Dennis Dean ORCID iD [aut], Seven Bridges Genomics [cph, fnd]
Maintainer: Soner Koc <soner.koc at sevenbridges.com>
BugReports: https://github.com/sbg/tidycwl/issues
License: AGPL-3
URL: https://sbg.github.io/tidycwl/, https://github.com/sbg/tidycwl
NeedsCompilation: no
SystemRequirements: PhantomJS (https://phantomjs.org), pandoc (>= 1.12.3) - https://pandoc.org.
Materials: README NEWS
CRAN checks: tidycwl results


Reference manual: tidycwl.pdf
Vignettes: A Grammar for Tidying CWL Workflows


Package source: tidycwl_1.0.7.tar.gz
Windows binaries: r-devel: tidycwl_1.0.7.zip, r-release: tidycwl_1.0.7.zip, r-oldrel: tidycwl_1.0.7.zip
macOS binaries: r-release (arm64): tidycwl_1.0.7.tgz, r-oldrel (arm64): tidycwl_1.0.7.tgz, r-release (x86_64): tidycwl_1.0.7.tgz, r-oldrel (x86_64): tidycwl_1.0.7.tgz
Old sources: tidycwl archive


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