st: Shrinkage t Statistic and CAT Score

This package implements the "shrinkage t" statistic introduced in Opgen-Rhein and Strimmer (2007) and a shrinkage estimate of the "correlation-adjusted t-score" (CAT score) described in Zuber and Strimmer (2009). It also offers a convenient interface to a number of other regularized t-statistics commonly employed in high-dimensional case-control studies.

Version: 1.2.2
Depends: R (≥ 2.15.1), sda (≥ 1.3.3), fdrtool (≥ 1.2.12)
Suggests: limma, samr
Published: 2014-04-18
Author: Rainer Opgen-Rhein, Verena Zuber, and Korbinian Strimmer.
Maintainer: Korbinian Strimmer <strimmer at uni-leipzig.de>
License: GPL (≥ 3)
URL: http://strimmerlab.org/software/st/
NeedsCompilation: no
Materials: NEWS
CRAN checks: st results

Downloads:

Reference manual: st.pdf
Package source: st_1.2.2.tar.gz
OS X binary: st_1.2.1.tgz
Windows binary: st_1.2.2.zip
Old sources: st archive

Reverse dependencies:

Reverse depends: BioMark, MAclinical
Reverse suggests: tileHMM