nucim: Nucleome Imaging Toolbox

Tools for 4D nucleome imaging. Quantitative analysis of the 3D nuclear landscape recorded with super-resolved fluorescence microscopy.

Version: 1.0.6
Depends: R (≥ 3.0.0), EBImage, bioimagetools (≥ 1.0)
Imports: fields, parallel, stringr
Suggests: knitr, rmarkdown, R.rsp
Published: 2018-10-09
Author: Volker Schmid [aut, cre]
Maintainer: Volker Schmid <stats at volkerschmid.de>
BugReports: https://github.com/bioimaginggroup/nucim/issues
License: GPL-3
URL: https://github.com/bioimaginggroup/nucim
NeedsCompilation: no
Citation: nucim citation info
Materials: README NEWS
CRAN checks: nucim results

Downloads:

Reference manual: nucim.pdf
Vignettes: Chromatin compaction classification using DAPI intensity
Workflow for nucleome analysis of many 3D SIM images
Workflow for 3D SIM nucleome analysis
Package source: nucim_1.0.6.tar.gz
Windows binaries: r-devel: nucim_1.0.6.zip, r-release: nucim_1.0.6.zip, r-oldrel: nucim_1.0.6.zip
OS X binaries: r-release: not available, r-oldrel: nucim_1.0.6.tgz
Old sources: nucim archive

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