RPANDA: Phylogenetic ANalyses of DiversificAtion

Implements macroevolutionary analyses on phylogenetic trees. See Morlon et al. (2010) <doi:10.1371/journal.pbio.1000493>, Morlon et al. (2011) <doi:10.1073/pnas.1102543108>, Condamine et al. (2013) <doi:10.1111/ele.12062>, Morlon et al. (2014) <doi:10.1111/ele.12251>, Manceau et al. (2015) <doi:10.1111/ele.12415>, Lewitus & Morlon (2016) <doi:10.1093/sysbio/syv116>, Drury et al. (2016) <doi:10.1093/sysbio/syw020>, Manceau et al. (2016) <doi:10.1093/sysbio/syw115>, Morlon et al. (2016) <doi:10.1111/2041-210X.12526>, Clavel & Morlon (2017) <doi:10.1073/pnas.1606868114>, Drury et al. (2017) <doi:10.1093/sysbio/syx079>, Lewitus & Morlon (2017) <doi:10.1093/sysbio/syx095>, Drury et al. (2018) <doi:10.1371/journal.pbio.2003563> and Clavel et al. (2019) <doi:10.1093/sysbio/syy045>.

Version: 1.5
Depends: R (≥ 2.14.2), picante, methods
Imports: ape, pspline, deSolve, igraph, TESS, cluster, fpc, pvclust, corpcor, phytools, mvMORPH (≥ 1.1.0), stats, graphics, grDevices, utils, geiger, mvtnorm, glassoFast, Rmpfr
Suggests: testthat
Published: 2019-01-30
Author: Hélène Morlon [aut, cre, cph], Eric Lewitus [aut, cph], Fabien Condamine [aut, cph], Marc Manceau [aut, cph], Julien Clavel [aut, cph], Jonathan Drury [aut, cph], Olivier Billaud [aut, cph]
Maintainer: Hélène Morlon <morlon at biologie.ens.fr>
License: GPL-2
URL: https://github.com/hmorlon/PANDA
NeedsCompilation: no
Citation: RPANDA citation info
Materials: README
CRAN checks: RPANDA results

Downloads:

Reference manual: RPANDA.pdf
Package source: RPANDA_1.5.tar.gz
Windows binaries: r-devel: RPANDA_1.5.zip, r-release: RPANDA_1.5.zip, r-oldrel: RPANDA_1.5.zip
OS X binaries: r-release: RPANDA_1.5.tgz, r-oldrel: RPANDA_1.5.tgz
Old sources: RPANDA archive

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