MAGEE: Mixed Model Association Test for GEne-Environment Interaction

Use a 'glmmkin' class object (GMMAT package) from the null model to perform generalized linear mixed model-based single-variant and variant set main effect tests, gene-environment interaction tests, and joint tests for association, as proposed in Wang et al. (2020) <doi:10.1002/gepi.22351>.

Version: 1.0.1
Depends: R (≥ 3.2.0)
Imports: Rcpp, Matrix, parallel, MASS, SeqArray, SeqVarTools, foreach, GMMAT, CompQuadForm
LinkingTo: Rcpp, RcppArmadillo
Suggests: doMC, testthat
Published: 2021-11-18
Author: Xinyu Wang [aut], Han Chen [aut, cre], Duy Pham [aut]
Maintainer: Han Chen <han.chen.2 at uth.tmc.edu>
License: GPL-3
Copyright: See COPYRIGHTS for details.
MAGEE copyright details
NeedsCompilation: yes
Materials: README
CRAN checks: MAGEE results

Documentation:

Reference manual: MAGEE.pdf
Vignettes: MAGEE

Downloads:

Package source: MAGEE_1.0.1.tar.gz
Windows binaries: r-devel: MAGEE_1.0.1.zip, r-devel-UCRT: MAGEE_1.0.1.zip, r-release: MAGEE_1.0.1.zip, r-oldrel: MAGEE_1.0.1.zip
macOS binaries: r-release (arm64): MAGEE_1.0.1.tgz, r-release (x86_64): MAGEE_1.0.1.tgz, r-oldrel: MAGEE_1.0.1.tgz
Old sources: MAGEE archive

Linking:

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