CloneSeeker: Seeking and Finding Clones in Copy Number and Sequencing Data

Defines the classes and functions used to simulate and to analyze data sets describing copy number variants and, optionally, sequencing mutations in order to detect clonal subsets. See Zucker et al. (2019) <doi:10.1093/bioinformatics/btz057>.

Version: 1.0.11
Depends: R (≥ 3.0)
Imports: methods, graphics, combinat, mc2d, quantmod
Published: 2022-06-30
DOI: 10.32614/CRAN.package.CloneSeeker
Author: Kevin R. Coombes, Mark Zucker
Maintainer: Kevin R. Coombes <krc at>
License: Apache License (== 2.0)
NeedsCompilation: no
CRAN checks: CloneSeeker results


Reference manual: CloneSeeker.pdf
Vignettes: CloneSeeker


Package source: CloneSeeker_1.0.11.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): CloneSeeker_1.0.11.tgz, r-oldrel (arm64): CloneSeeker_1.0.11.tgz, r-release (x86_64): CloneSeeker_1.0.11.tgz, r-oldrel (x86_64): CloneSeeker_1.0.11.tgz
Old sources: CloneSeeker archive


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