Last updated on 2022-05-26 23:53:00 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.5.2 | 12.31 | 261.59 | 273.90 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 0.5.2 | 11.32 | 195.42 | 206.74 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.5.3 | 286.60 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 0.5.3 | 264.03 | OK | |||
| r-devel-windows-x86_64 | 0.5.2 | 97.00 | 278.00 | 375.00 | OK | |
| r-patched-linux-x86_64 | 0.5.2 | 17.82 | 222.74 | 240.56 | ERROR | |
| r-release-linux-x86_64 | 0.5.3 | 8.46 | 210.04 | 218.50 | OK | |
| r-release-macos-arm64 | 0.5.3 | 91.00 | OK | |||
| r-release-macos-x86_64 | 0.5.2 | 109.00 | OK | |||
| r-release-windows-x86_64 | 0.5.3 | 96.00 | 203.00 | 299.00 | OK | |
| r-oldrel-macos-arm64 | 0.5.3 | 81.00 | OK | |||
| r-oldrel-macos-x86_64 | 0.5.2 | 107.00 | OK | |||
| r-oldrel-windows-ix86+x86_64 | 0.5.3 | 21.00 | 233.00 | 254.00 | ERROR |
Version: 0.5.2
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: 'mlr3proba'
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64
Version: 0.5.2
Check: Rd cross-references
Result: NOTE
Unknown package 'mlr3proba' in Rd xrefs
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64
Version: 0.5.2
Check: examples
Result: ERROR
Running examples in 'mlr3learners-Ex.R' failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: mlr_learners_surv.cv_glmnet
> ### Title: Cross-Validated GLM with Elastic Net Regularization Survival
> ### Learner
> ### Aliases: mlr_learners_surv.cv_glmnet LearnerSurvCVGlmnet
>
> ### ** Examples
>
> if (requireNamespace("glmnet", quietly = TRUE)) {
+ learner = mlr3::lrn("surv.cv_glmnet")
+ print(learner)
+
+ # available parameters:
+ learner$param_set$ids()
+ }
Error in loadNamespace(x) : there is no package called 'mlr3proba'
Calls: <Anonymous> ... loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64
Version: 0.5.2
Check: tests
Result: ERROR
Running 'testthat.R' [155s/184s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> if (requireNamespace("testthat", quietly = TRUE)) {
+ library("testthat")
+ library("mlr3learners")
+ test_check("mlr3learners")
+ }
Loading required package: mlr3
[ FAIL 7 | WARN 0 | SKIP 2 | PASS 617 ]
== Skipped tests ===============================================================
* On CRAN (2)
== Failed tests ================================================================
-- Error (test_surv_cv_glmnet.R:5:3): autotest ---------------------------------
<packageNotFoundError/error/condition>
Error in `loadNamespace(x)`: there is no package called 'mlr3proba'
Backtrace:
x
1. +-mlr3::lrn("surv.cv_glmnet") at test_surv_cv_glmnet.R:5:2
2. | \-mlr3misc::dictionary_sugar_get(mlr_learners, .key, ...)
3. | \-mlr3misc:::dictionary_get(dict, .key)
4. | \-mlr3misc:::dictionary_initialize_item(key, obj, dots)
5. | +-base::do.call(constructor$new, cargs)
6. | \-R6 `<fn>`()
7. | \-R6 get_inherit()
8. | \-base::eval(inherit, parent_env, NULL)
9. | \-base::eval(inherit, parent_env, NULL)
10. \-base::loadNamespace(x)
11. \-base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
12. \-base withOneRestart(expr, restarts[[1L]])
13. \-base doWithOneRestart(return(expr), restart)
-- Error (test_surv_cv_glmnet.R:14:3): selected_features -----------------------
Error: Element with key 'gbcs' not found in DictionaryTask!
Backtrace:
x
1. \-mlr3::tsk("gbcs") at test_surv_cv_glmnet.R:14:2
2. \-mlr3misc::dictionary_sugar_get(mlr_tasks, .key, ...)
3. \-mlr3misc:::dictionary_get(dict, .key)
4. \-mlr3misc:::dictionary_retrieve_item(self, key)
5. \-mlr3misc::stopf(...)
-- Error (test_surv_glmnet.R:5:3): autotest ------------------------------------
<packageNotFoundError/error/condition>
Error in `loadNamespace(x)`: there is no package called 'mlr3proba'
Backtrace:
x
1. +-mlr3::lrn("surv.glmnet", lambda = 0.1) at test_surv_glmnet.R:5:2
2. | \-mlr3misc::dictionary_sugar_get(mlr_learners, .key, ...)
3. | +-checkmate::assert_r6(dictionary_initialize_item(.key, obj, dots[ii]))
4. | | \-checkmate::checkR6(...)
5. | \-mlr3misc:::dictionary_initialize_item(.key, obj, dots[ii])
6. | +-base::do.call(constructor$new, cargs)
7. | \-R6 `<fn>`()
8. | \-R6 get_inherit()
9. | \-base::eval(inherit, parent_env, NULL)
10. | \-base::eval(inherit, parent_env, NULL)
11. \-base::loadNamespace(x)
12. \-base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
13. \-base withOneRestart(expr, restarts[[1L]])
14. \-base doWithOneRestart(return(expr), restart)
-- Error (test_surv_glmnet.R:14:3): selected_features --------------------------
Error: Element with key 'gbcs' not found in DictionaryTask!
Backtrace:
x
1. \-mlr3::tsk("gbcs") at test_surv_glmnet.R:14:2
2. \-mlr3misc::dictionary_sugar_get(mlr_tasks, .key, ...)
3. \-mlr3misc:::dictionary_get(dict, .key)
4. \-mlr3misc:::dictionary_retrieve_item(self, key)
5. \-mlr3misc::stopf(...)
-- Error (test_surv_ranger.R:2:3): autotest ------------------------------------
<packageNotFoundError/error/condition>
Error in `loadNamespace(x)`: there is no package called 'mlr3proba'
Backtrace:
x
1. +-global with_seed(...) at test_surv_ranger.R:2:2
2. | \-base::force(expr)
3. +-mlr_learners$get("surv.ranger") at test_surv_ranger.R:3:4
4. | \-mlr3misc:::dictionary_get(self, key, ...)
5. | \-mlr3misc:::dictionary_initialize_item(key, obj, dots)
6. | +-base::do.call(constructor$new, cargs)
7. | \-R6 `<fn>`()
8. | \-R6 get_inherit()
9. | \-base::eval(inherit, parent_env, NULL)
10. | \-base::eval(inherit, parent_env, NULL)
11. \-base::loadNamespace(x)
12. \-base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
13. \-base withOneRestart(expr, restarts[[1L]])
14. \-base doWithOneRestart(return(expr), restart)
-- Error (test_surv_ranger.R:12:3): importance ---------------------------------
<packageNotFoundError/error/condition>
Error in `loadNamespace(x)`: there is no package called 'mlr3proba'
Backtrace:
x
1. +-mlr_learners$get("surv.ranger") at test_surv_ranger.R:12:2
2. | \-mlr3misc:::dictionary_get(self, key, ...)
3. | \-mlr3misc:::dictionary_initialize_item(key, obj, dots)
4. | +-base::do.call(constructor$new, cargs)
5. | \-R6 `<fn>`()
6. | \-R6 get_inherit()
7. | \-base::eval(inherit, parent_env, NULL)
8. | \-base::eval(inherit, parent_env, NULL)
9. \-base::loadNamespace(x)
10. \-base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
11. \-base withOneRestart(expr, restarts[[1L]])
12. \-base doWithOneRestart(return(expr), restart)
-- Error (test_surv_ranger.R:18:3): mtry.ratio ---------------------------------
Error: Element with key 'rats' not found in DictionaryTask!
Backtrace:
x
1. \-mlr3::tsk("rats") at test_surv_ranger.R:18:2
2. \-mlr3misc::dictionary_sugar_get(mlr_tasks, .key, ...)
3. \-mlr3misc:::dictionary_get(dict, .key)
4. \-mlr3misc:::dictionary_retrieve_item(self, key)
5. \-mlr3misc::stopf(...)
[ FAIL 7 | WARN 0 | SKIP 2 | PASS 617 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 0.5.2
Check: tests
Result: ERROR
Running ‘testthat.R’ [104s/205s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> if (requireNamespace("testthat", quietly = TRUE)) {
+ library("testthat")
+ library("mlr3learners")
+ test_check("mlr3learners")
+ }
Loading required package: mlr3
[ FAIL 7 | WARN 0 | SKIP 2 | PASS 617 ]
══ Skipped tests ═══════════════════════════════════════════════════════════════
• On CRAN (2)
══ Failed tests ════════════════════════════════════════════════════════════════
── Error (test_surv_cv_glmnet.R:5:3): autotest ─────────────────────────────────
<packageNotFoundError/error/condition>
Error in `loadNamespace(x)`: there is no package called 'mlr3proba'
Backtrace:
▆
1. ├─mlr3::lrn("surv.cv_glmnet") at test_surv_cv_glmnet.R:5:2
2. │ └─mlr3misc::dictionary_sugar_get(mlr_learners, .key, ...)
3. │ └─mlr3misc:::dictionary_get(dict, .key)
4. │ └─mlr3misc:::dictionary_initialize_item(key, obj, dots)
5. │ ├─base::do.call(constructor$new, cargs)
6. │ └─R6 `<fn>`()
7. │ └─R6 get_inherit()
8. │ └─base::eval(inherit, parent_env, NULL)
9. │ └─base::eval(inherit, parent_env, NULL)
10. └─base::loadNamespace(x)
11. └─base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
12. └─base withOneRestart(expr, restarts[[1L]])
13. └─base doWithOneRestart(return(expr), restart)
── Error (test_surv_cv_glmnet.R:14:3): selected_features ───────────────────────
Error: Element with key 'gbcs' not found in DictionaryTask!
Backtrace:
▆
1. └─mlr3::tsk("gbcs") at test_surv_cv_glmnet.R:14:2
2. └─mlr3misc::dictionary_sugar_get(mlr_tasks, .key, ...)
3. └─mlr3misc:::dictionary_get(dict, .key)
4. └─mlr3misc:::dictionary_retrieve_item(self, key)
5. └─mlr3misc::stopf(...)
── Error (test_surv_glmnet.R:5:3): autotest ────────────────────────────────────
<packageNotFoundError/error/condition>
Error in `loadNamespace(x)`: there is no package called 'mlr3proba'
Backtrace:
▆
1. ├─mlr3::lrn("surv.glmnet", lambda = 0.1) at test_surv_glmnet.R:5:2
2. │ └─mlr3misc::dictionary_sugar_get(mlr_learners, .key, ...)
3. │ ├─checkmate::assert_r6(dictionary_initialize_item(.key, obj, dots[ii]))
4. │ │ └─checkmate::checkR6(...)
5. │ └─mlr3misc:::dictionary_initialize_item(.key, obj, dots[ii])
6. │ ├─base::do.call(constructor$new, cargs)
7. │ └─R6 `<fn>`()
8. │ └─R6 get_inherit()
9. │ └─base::eval(inherit, parent_env, NULL)
10. │ └─base::eval(inherit, parent_env, NULL)
11. └─base::loadNamespace(x)
12. └─base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
13. └─base withOneRestart(expr, restarts[[1L]])
14. └─base doWithOneRestart(return(expr), restart)
── Error (test_surv_glmnet.R:14:3): selected_features ──────────────────────────
Error: Element with key 'gbcs' not found in DictionaryTask!
Backtrace:
▆
1. └─mlr3::tsk("gbcs") at test_surv_glmnet.R:14:2
2. └─mlr3misc::dictionary_sugar_get(mlr_tasks, .key, ...)
3. └─mlr3misc:::dictionary_get(dict, .key)
4. └─mlr3misc:::dictionary_retrieve_item(self, key)
5. └─mlr3misc::stopf(...)
── Error (test_surv_ranger.R:2:3): autotest ────────────────────────────────────
<packageNotFoundError/error/condition>
Error in `loadNamespace(x)`: there is no package called 'mlr3proba'
Backtrace:
▆
1. ├─global with_seed(...) at test_surv_ranger.R:2:2
2. │ └─base::force(expr)
3. ├─mlr_learners$get("surv.ranger") at test_surv_ranger.R:3:4
4. │ └─mlr3misc:::dictionary_get(self, key, ...)
5. │ └─mlr3misc:::dictionary_initialize_item(key, obj, dots)
6. │ ├─base::do.call(constructor$new, cargs)
7. │ └─R6 `<fn>`()
8. │ └─R6 get_inherit()
9. │ └─base::eval(inherit, parent_env, NULL)
10. │ └─base::eval(inherit, parent_env, NULL)
11. └─base::loadNamespace(x)
12. └─base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
13. └─base withOneRestart(expr, restarts[[1L]])
14. └─base doWithOneRestart(return(expr), restart)
── Error (test_surv_ranger.R:12:3): importance ─────────────────────────────────
<packageNotFoundError/error/condition>
Error in `loadNamespace(x)`: there is no package called 'mlr3proba'
Backtrace:
▆
1. ├─mlr_learners$get("surv.ranger") at test_surv_ranger.R:12:2
2. │ └─mlr3misc:::dictionary_get(self, key, ...)
3. │ └─mlr3misc:::dictionary_initialize_item(key, obj, dots)
4. │ ├─base::do.call(constructor$new, cargs)
5. │ └─R6 `<fn>`()
6. │ └─R6 get_inherit()
7. │ └─base::eval(inherit, parent_env, NULL)
8. │ └─base::eval(inherit, parent_env, NULL)
9. └─base::loadNamespace(x)
10. └─base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
11. └─base withOneRestart(expr, restarts[[1L]])
12. └─base doWithOneRestart(return(expr), restart)
── Error (test_surv_ranger.R:18:3): mtry.ratio ─────────────────────────────────
Error: Element with key 'rats' not found in DictionaryTask!
Backtrace:
▆
1. └─mlr3::tsk("rats") at test_surv_ranger.R:18:2
2. └─mlr3misc::dictionary_sugar_get(mlr_tasks, .key, ...)
3. └─mlr3misc:::dictionary_get(dict, .key)
4. └─mlr3misc:::dictionary_retrieve_item(self, key)
5. └─mlr3misc::stopf(...)
[ FAIL 7 | WARN 0 | SKIP 2 | PASS 617 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.5.2
Check: tests
Result: ERROR
Running ‘testthat.R’ [123s/153s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> if (requireNamespace("testthat", quietly = TRUE)) {
+ library("testthat")
+ library("mlr3learners")
+ test_check("mlr3learners")
+ }
Loading required package: mlr3
[ FAIL 7 | WARN 0 | SKIP 2 | PASS 617 ]
══ Skipped tests ═══════════════════════════════════════════════════════════════
• On CRAN (2)
══ Failed tests ════════════════════════════════════════════════════════════════
── Error (test_surv_cv_glmnet.R:5:3): autotest ─────────────────────────────────
<packageNotFoundError/error/condition>
Error in `loadNamespace(x)`: there is no package called 'mlr3proba'
Backtrace:
▆
1. ├─mlr3::lrn("surv.cv_glmnet") at test_surv_cv_glmnet.R:5:2
2. │ └─mlr3misc::dictionary_sugar_get(mlr_learners, .key, ...)
3. │ └─mlr3misc:::dictionary_get(dict, .key)
4. │ └─mlr3misc:::dictionary_initialize_item(key, obj, dots)
5. │ ├─base::do.call(constructor$new, cargs)
6. │ └─R6 `<fn>`()
7. │ └─R6 get_inherit()
8. │ └─base::eval(inherit, parent_env, NULL)
9. │ └─base::eval(inherit, parent_env, NULL)
10. └─base::loadNamespace(x)
11. └─base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
12. └─base withOneRestart(expr, restarts[[1L]])
13. └─base doWithOneRestart(return(expr), restart)
── Error (test_surv_cv_glmnet.R:14:3): selected_features ───────────────────────
Error: Element with key 'gbcs' not found in DictionaryTask!
Backtrace:
▆
1. └─mlr3::tsk("gbcs") at test_surv_cv_glmnet.R:14:2
2. └─mlr3misc::dictionary_sugar_get(mlr_tasks, .key, ...)
3. └─mlr3misc:::dictionary_get(dict, .key)
4. └─mlr3misc:::dictionary_retrieve_item(self, key)
5. └─mlr3misc::stopf(...)
── Error (test_surv_glmnet.R:5:3): autotest ────────────────────────────────────
<packageNotFoundError/error/condition>
Error in `loadNamespace(x)`: there is no package called 'mlr3proba'
Backtrace:
▆
1. ├─mlr3::lrn("surv.glmnet", lambda = 0.1) at test_surv_glmnet.R:5:2
2. │ └─mlr3misc::dictionary_sugar_get(mlr_learners, .key, ...)
3. │ ├─checkmate::assert_r6(dictionary_initialize_item(.key, obj, dots[ii]))
4. │ │ └─checkmate::checkR6(...)
5. │ └─mlr3misc:::dictionary_initialize_item(.key, obj, dots[ii])
6. │ ├─base::do.call(constructor$new, cargs)
7. │ └─R6 `<fn>`()
8. │ └─R6 get_inherit()
9. │ └─base::eval(inherit, parent_env, NULL)
10. │ └─base::eval(inherit, parent_env, NULL)
11. └─base::loadNamespace(x)
12. └─base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
13. └─base withOneRestart(expr, restarts[[1L]])
14. └─base doWithOneRestart(return(expr), restart)
── Error (test_surv_glmnet.R:14:3): selected_features ──────────────────────────
Error: Element with key 'gbcs' not found in DictionaryTask!
Backtrace:
▆
1. └─mlr3::tsk("gbcs") at test_surv_glmnet.R:14:2
2. └─mlr3misc::dictionary_sugar_get(mlr_tasks, .key, ...)
3. └─mlr3misc:::dictionary_get(dict, .key)
4. └─mlr3misc:::dictionary_retrieve_item(self, key)
5. └─mlr3misc::stopf(...)
── Error (test_surv_ranger.R:2:3): autotest ────────────────────────────────────
<packageNotFoundError/error/condition>
Error in `loadNamespace(x)`: there is no package called 'mlr3proba'
Backtrace:
▆
1. ├─global with_seed(...) at test_surv_ranger.R:2:2
2. │ └─base::force(expr)
3. ├─mlr_learners$get("surv.ranger") at test_surv_ranger.R:3:4
4. │ └─mlr3misc:::dictionary_get(self, key, ...)
5. │ └─mlr3misc:::dictionary_initialize_item(key, obj, dots)
6. │ ├─base::do.call(constructor$new, cargs)
7. │ └─R6 `<fn>`()
8. │ └─R6 get_inherit()
9. │ └─base::eval(inherit, parent_env, NULL)
10. │ └─base::eval(inherit, parent_env, NULL)
11. └─base::loadNamespace(x)
12. └─base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
13. └─base withOneRestart(expr, restarts[[1L]])
14. └─base doWithOneRestart(return(expr), restart)
── Error (test_surv_ranger.R:12:3): importance ─────────────────────────────────
<packageNotFoundError/error/condition>
Error in `loadNamespace(x)`: there is no package called 'mlr3proba'
Backtrace:
▆
1. ├─mlr_learners$get("surv.ranger") at test_surv_ranger.R:12:2
2. │ └─mlr3misc:::dictionary_get(self, key, ...)
3. │ └─mlr3misc:::dictionary_initialize_item(key, obj, dots)
4. │ ├─base::do.call(constructor$new, cargs)
5. │ └─R6 `<fn>`()
6. │ └─R6 get_inherit()
7. │ └─base::eval(inherit, parent_env, NULL)
8. │ └─base::eval(inherit, parent_env, NULL)
9. └─base::loadNamespace(x)
10. └─base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
11. └─base withOneRestart(expr, restarts[[1L]])
12. └─base doWithOneRestart(return(expr), restart)
── Error (test_surv_ranger.R:18:3): mtry.ratio ─────────────────────────────────
Error: Element with key 'rats' not found in DictionaryTask!
Backtrace:
▆
1. └─mlr3::tsk("rats") at test_surv_ranger.R:18:2
2. └─mlr3misc::dictionary_sugar_get(mlr_tasks, .key, ...)
3. └─mlr3misc:::dictionary_get(dict, .key)
4. └─mlr3misc:::dictionary_retrieve_item(self, key)
5. └─mlr3misc::stopf(...)
[ FAIL 7 | WARN 0 | SKIP 2 | PASS 617 ]
Error: Test failures
Execution halted
Flavor: r-patched-linux-x86_64
Version: 0.5.3
Check: tests
Result: ERROR
Running 'testthat.R' [135s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> if (requireNamespace("testthat", quietly = TRUE)) {
+ library("testthat")
+ library("mlr3learners")
+ test_check("mlr3learners")
+ }
Loading required package: mlr3
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 618 ]
== Failed tests ================================================================
-- Failure (test_classif_nnet.R:7:3): autotest ---------------------------------
`result` is not TRUE
`actual` is a list
`expected` is a logical vector (TRUE)
Response is different for different predict types
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 618 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-windows-ix86+x86_64