CRAN Package Check Results for Package geostatsp

Last updated on 2019-10-20 23:47:25 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.7.8 26.07 405.79 431.86 NOTE
r-devel-linux-x86_64-debian-gcc 1.7.8 20.77 309.64 330.41 NOTE
r-devel-linux-x86_64-fedora-clang 1.7.8 742.41 WARN
r-devel-linux-x86_64-fedora-gcc 1.7.8 745.97 WARN
r-devel-windows-ix86+x86_64 1.7.8 43.00 518.00 561.00 NOTE
r-patched-linux-x86_64 1.7.8 21.26 398.14 419.40 NOTE
r-patched-solaris-x86 1.7.8 815.40 NOTE
r-release-linux-x86_64 1.7.8 21.93 402.35 424.28 NOTE
r-release-windows-ix86+x86_64 1.7.8 64.00 520.00 584.00 NOTE
r-release-osx-x86_64 1.7.8 NOTE
r-oldrel-windows-ix86+x86_64 1.7.8 36.00 518.00 554.00 NOTE
r-oldrel-osx-x86_64 1.7.8 NOTE

Check Details

Version: 1.7.8
Check: package dependencies
Result: NOTE
    Package which this enhances but not available for checking: 'INLA'
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64, r-oldrel-osx-x86_64

Version: 1.7.8
Check: installed package size
Result: NOTE
     installed size is 5.3Mb
     sub-directories of 1Mb or more:
     data 3.8Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-ix86+x86_64, r-patched-solaris-x86, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 1.7.8
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building ‘glgm.Rnw’ using knitr
    --- finished re-building ‘glgm.Rnw’
    
    --- re-building ‘lgcp.Rnw’ using knitr
    --- finished re-building ‘lgcp.Rnw’
    
    make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/geostatsp.Rcheck/vign_test/geostatsp/vignettes'
    xelatex lgcp.tex;
    This is XeTeX, Version 3.14159265-2.6-0.999991 (TeX Live 2019) (preloaded format=xelatex)
     restricted \write18 enabled.
    entering extended mode
    (./lgcp.tex
    LaTeX2e <2019-10-01> patch level 1
    (/usr/local/texlive/2019/texmf-dist/tex/latex/base/article.cls
    Document Class: article 2019/08/27 v1.4j Standard LaTeX document class
    (/usr/local/texlive/2019/texmf-dist/tex/latex/base/size12.clo))
    (/usr/local/texlive/2019/texmf-dist/tex/latex/graphics/graphicx.sty
    (/usr/local/texlive/2019/texmf-dist/tex/latex/graphics/keyval.sty)
    (/usr/local/texlive/2019/texmf-dist/tex/latex/graphics/graphics.sty
    (/usr/local/texlive/2019/texmf-dist/tex/latex/graphics/trig.sty)
    (/usr/local/texlive/2019/texmf-dist/tex/latex/graphics-cfg/graphics.cfg)
    (/usr/local/texlive/2019/texmf-dist/tex/latex/graphics-def/xetex.def)))
    (/usr/local/texlive/2019/texmf-dist/tex/latex/graphics/color.sty
    (/usr/local/texlive/2019/texmf-dist/tex/latex/graphics-cfg/color.cfg))
    (/usr/local/texlive/2019/texmf-dist/tex/latex/framed/framed.sty)
    (/usr/local/texlive/2019/texmf-dist/tex/latex/base/alltt.sty)
    (/usr/local/texlive/2019/texmf-dist/tex/latex/geometry/geometry.sty
    (/usr/local/texlive/2019/texmf-dist/tex/generic/oberdiek/ifpdf.sty)
    (/usr/local/texlive/2019/texmf-dist/tex/generic/oberdiek/ifvtex.sty)
    (/usr/local/texlive/2019/texmf-dist/tex/generic/ifxetex/ifxetex.sty))
    (/usr/local/texlive/2019/texmf-dist/tex/latex/caption/caption.sty
    (/usr/local/texlive/2019/texmf-dist/tex/latex/caption/caption3.sty))
    (/usr/local/texlive/2019/texmf-dist/tex/latex/caption/subcaption.sty)
    (/usr/local/texlive/2019/texmf-dist/tex/latex/upquote/upquote.sty
    (/usr/local/texlive/2019/texmf-dist/tex/latex/base/textcomp.sty
    (/usr/local/texlive/2019/texmf-dist/tex/latex/base/ts1enc.def)))
    No file lgcp.aux.
    (/usr/local/texlive/2019/texmf-dist/tex/latex/base/ts1cmr.fd)
    *geometry* driver: auto-detecting
    *geometry* detected driver: xetex
    
    Overfull \hbox (59.445pt too wide) in paragraph at lines 79--79
    []\TU/lmtt/m/it/12 ## map images will be cached in /tmp/RtmpXMiZnG/working_dir
    /Rtmpt3LSNf/mapmiscCache[]
    
    Overfull \hbox (67.72488pt too wide) in paragraph at lines 121--121
    [][]\TU/lmtt/b/n/12 if[][]\TU/lmtt/m/n/12 ([][]\TU/lmtt/b/n/12 requireNamespace
    [][]\TU/lmtt/m/n/12 ([][]"rgdal"[][])[] []&[] []\TU/lmtt/b/n/12 requireNamespac
    e[][]\TU/lmtt/m/n/12 ([][]"rgeos"[][])[] []&[] []\TU/lmtt/b/n/12 requireNamespa
    ce[][]\TU/lmtt/m/n/12 ([][]"INLA"[][])) {[][]
    [1]
    Overfull \hbox (67.72488pt too wide) in paragraph at lines 152--152
    [][]\TU/lmtt/b/n/12 if[][]\TU/lmtt/m/n/12 ([][]\TU/lmtt/b/n/12 requireNamespace
    [][]\TU/lmtt/m/n/12 ([][]"rgdal"[][])[] []&[] []\TU/lmtt/b/n/12 requireNamespac
    e[][]\TU/lmtt/m/n/12 ([][]"rgeos"[][])[] []&[] []\TU/lmtt/b/n/12 requireNamespa
    ce[][]\TU/lmtt/m/n/12 ([][]"INLA"[][])) {[][]
    
    Overfull \hbox (67.72488pt too wide) in paragraph at lines 178--178
    [][]\TU/lmtt/b/n/12 if[][]\TU/lmtt/m/n/12 ([][]\TU/lmtt/b/n/12 requireNamespace
    [][]\TU/lmtt/m/n/12 ([][]"rgdal"[][])[] []&[] []\TU/lmtt/b/n/12 requireNamespac
    e[][]\TU/lmtt/m/n/12 ([][]"rgeos"[][])[] []&[] []\TU/lmtt/b/n/12 requireNamespa
    ce[][]\TU/lmtt/m/n/12 ([][]"INLA"[][])) {[][]
    
    Overfull \hbox (81.3446pt too wide) in paragraph at lines 186--186
    [] []\TU/lmtt/m/n/12 range[] []=[] []\TU
    /lmtt/b/n/12 cbind[][]\TU/lmtt/m/n/12 (rangeSeq,[] []\TU/lmtt/b/n/12 dexp[][]\T
    U/lmtt/m/n/12 (rangeSeq,[] []1[][]/[][]5000[][]))),[][]
    [2]
    ! Argument of \@tempa has an extra }.
    <inserted text>
     \par
    l.275 ...dth=0.48\textwidth]{figure/priorPost-1} }
    
    ?
    ! Emergency stop.
    <inserted text>
     \par
    l.275 ...dth=0.48\textwidth]{figure/priorPost-1} }
    
    Output written on lgcp.pdf (2 pages).
    Transcript written on lgcp.log.
    make[1]: *** [Makefile:11: lgcp.pdf] Error 1
    make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/geostatsp.Rcheck/vign_test/geostatsp/vignettes'
    Error in tools:::buildVignettes(dir = "/data/gannet/ripley/R/packages/tests-clang/geostatsp.Rcheck/vign_test/geostatsp", :
     running 'make' failed
    Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang

Version: 1.7.8
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building ‘glgm.Rnw’ using knitr
    --- finished re-building ‘glgm.Rnw’
    
    --- re-building ‘lgcp.Rnw’ using knitr
    --- finished re-building ‘lgcp.Rnw’
    
    make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/geostatsp.Rcheck/vign_test/geostatsp/vignettes'
    xelatex lgcp.tex;
    This is XeTeX, Version 3.14159265-2.6-0.999991 (TeX Live 2019) (preloaded format=xelatex)
     restricted \write18 enabled.
    entering extended mode
    (./lgcp.tex
    LaTeX2e <2019-10-01>
    (/usr/local/texlive/2019/texmf-dist/tex/latex/base/article.cls
    Document Class: article 2019/08/27 v1.4j Standard LaTeX document class
    (/usr/local/texlive/2019/texmf-dist/tex/latex/base/size12.clo))
    (/usr/local/texlive/2019/texmf-dist/tex/latex/graphics/graphicx.sty
    (/usr/local/texlive/2019/texmf-dist/tex/latex/graphics/keyval.sty)
    (/usr/local/texlive/2019/texmf-dist/tex/latex/graphics/graphics.sty
    (/usr/local/texlive/2019/texmf-dist/tex/latex/graphics/trig.sty)
    (/usr/local/texlive/2019/texmf-dist/tex/latex/graphics-cfg/graphics.cfg)
    (/usr/local/texlive/2019/texmf-dist/tex/latex/graphics-def/xetex.def)))
    (/usr/local/texlive/2019/texmf-dist/tex/latex/graphics/color.sty
    (/usr/local/texlive/2019/texmf-dist/tex/latex/graphics-cfg/color.cfg))
    (/usr/local/texlive/2019/texmf-dist/tex/latex/framed/framed.sty)
    (/usr/local/texlive/2019/texmf-dist/tex/latex/base/alltt.sty)
    (/usr/local/texlive/2019/texmf-dist/tex/latex/geometry/geometry.sty
    (/usr/local/texlive/2019/texmf-dist/tex/generic/oberdiek/ifpdf.sty)
    (/usr/local/texlive/2019/texmf-dist/tex/generic/oberdiek/ifvtex.sty)
    (/usr/local/texlive/2019/texmf-dist/tex/generic/ifxetex/ifxetex.sty))
    (/usr/local/texlive/2019/texmf-dist/tex/latex/caption/caption.sty
    (/usr/local/texlive/2019/texmf-dist/tex/latex/caption/caption3.sty))
    (/usr/local/texlive/2019/texmf-dist/tex/latex/caption/subcaption.sty)
    (/usr/local/texlive/2019/texmf-dist/tex/latex/upquote/upquote.sty
    (/usr/local/texlive/2019/texmf-dist/tex/latex/base/textcomp.sty
    (/usr/local/texlive/2019/texmf-dist/tex/latex/base/ts1enc.def)))
    No file lgcp.aux.
    (/usr/local/texlive/2019/texmf-dist/tex/latex/base/ts1cmr.fd)
    *geometry* driver: auto-detecting
    *geometry* detected driver: xetex
    
    Overfull \hbox (59.445pt too wide) in paragraph at lines 79--79
    []\TU/lmtt/m/it/12 ## map images will be cached in /tmp/RtmpdBWfcI/working_dir
    /Rtmpgs0GVf/mapmiscCache[]
    
    Overfull \hbox (67.72488pt too wide) in paragraph at lines 121--121
    [][]\TU/lmtt/b/n/12 if[][]\TU/lmtt/m/n/12 ([][]\TU/lmtt/b/n/12 requireNamespace
    [][]\TU/lmtt/m/n/12 ([][]"rgdal"[][])[] []&[] []\TU/lmtt/b/n/12 requireNamespac
    e[][]\TU/lmtt/m/n/12 ([][]"rgeos"[][])[] []&[] []\TU/lmtt/b/n/12 requireNamespa
    ce[][]\TU/lmtt/m/n/12 ([][]"INLA"[][])) {[][]
    [1]
    Overfull \hbox (67.72488pt too wide) in paragraph at lines 152--152
    [][]\TU/lmtt/b/n/12 if[][]\TU/lmtt/m/n/12 ([][]\TU/lmtt/b/n/12 requireNamespace
    [][]\TU/lmtt/m/n/12 ([][]"rgdal"[][])[] []&[] []\TU/lmtt/b/n/12 requireNamespac
    e[][]\TU/lmtt/m/n/12 ([][]"rgeos"[][])[] []&[] []\TU/lmtt/b/n/12 requireNamespa
    ce[][]\TU/lmtt/m/n/12 ([][]"INLA"[][])) {[][]
    
    Overfull \hbox (67.72488pt too wide) in paragraph at lines 178--178
    [][]\TU/lmtt/b/n/12 if[][]\TU/lmtt/m/n/12 ([][]\TU/lmtt/b/n/12 requireNamespace
    [][]\TU/lmtt/m/n/12 ([][]"rgdal"[][])[] []&[] []\TU/lmtt/b/n/12 requireNamespac
    e[][]\TU/lmtt/m/n/12 ([][]"rgeos"[][])[] []&[] []\TU/lmtt/b/n/12 requireNamespa
    ce[][]\TU/lmtt/m/n/12 ([][]"INLA"[][])) {[][]
    
    Overfull \hbox (81.3446pt too wide) in paragraph at lines 186--186
    [] []\TU/lmtt/m/n/12 range[] []=[] []\TU
    /lmtt/b/n/12 cbind[][]\TU/lmtt/m/n/12 (rangeSeq,[] []\TU/lmtt/b/n/12 dexp[][]\T
    U/lmtt/m/n/12 (rangeSeq,[] []1[][]/[][]5000[][]))),[][]
    [2]
    ! Argument of \@tempa has an extra }.
    <inserted text>
     \par
    l.275 ...dth=0.48\textwidth]{figure/priorPost-1} }
    
    ?
    ! Emergency stop.
    <inserted text>
     \par
    l.275 ...dth=0.48\textwidth]{figure/priorPost-1} }
    
    Output written on lgcp.pdf (2 pages).
    Transcript written on lgcp.log.
    make[1]: *** [Makefile:11: lgcp.pdf] Error 1
    make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/geostatsp.Rcheck/vign_test/geostatsp/vignettes'
    Error in tools:::buildVignettes(dir = "/data/gannet/ripley/R/packages/tests-devel/geostatsp.Rcheck/vign_test/geostatsp", :
     running 'make' failed
    Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc