CRAN Package Check Results for Package RxODE

Last updated on 2019-05-19 02:46:45 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.8.0-9 129.84 155.63 285.47 ERROR
r-devel-linux-x86_64-debian-gcc 0.8.0-9 144.18 123.35 267.53 NOTE
r-devel-linux-x86_64-fedora-clang 0.8.0-9 380.33 NOTE
r-devel-linux-x86_64-fedora-gcc 0.8.0-9 391.77 NOTE
r-devel-windows-ix86+x86_64 0.8.0-9 381.00 382.00 763.00 NOTE
r-patched-linux-x86_64 0.8.0-9 161.45 159.55 321.00 OK
r-patched-solaris-x86 0.8.0-9 468.70 NOTE
r-release-linux-x86_64 0.8.0-9 157.51 158.43 315.94 OK
r-release-windows-ix86+x86_64 0.8.0-9 370.00 353.00 723.00 NOTE
r-release-osx-x86_64 0.8.0-9 NOTE
r-oldrel-windows-ix86+x86_64 0.8.0-9 307.00 411.00 718.00 NOTE
r-oldrel-osx-x86_64 0.8.0-9 NOTE

Additional issues

LTO

Check Details

Version: 0.8.0-9
Check: use of PKG_*FLAGS in Makefiles
Result: NOTE
     PKG_FCFLAGS set in 'src/Makevars.in' without any corresponding files
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-ix86+x86_64

Version: 0.8.0-9
Check: tests
Result: ERROR
     Running 'testthat.R' [41s/42s]
    Running the tests in 'tests/testthat.R' failed.
    Complete output:
     > Sys.setenv("R_TESTS" = "")
     > library(testthat)
     > library(RxODE)
     > test_check("RxODE")
     OMP: Warning #96: Cannot form a team with 32 threads, using 3 instead.
     OMP: Hint Consider unsetting KMP_DEVICE_THREAD_LIMIT (KMP_ALL_THREADS), KMP_TEAMS_THREAD_LIMIT, and OMP_THREAD_LIMIT (if any are set).
     -- 1. Failure: omega chol (@test-omega-chol.R#14) -----------------------------
     v$omega not equal to `mcov`.
     56/64 mismatches (average diff: 1.68e-07)
     [1] 6.4864 - 6.4864 == -3.84e-08
     [3] 2.2952 - 2.2952 == -8.43e-08
     [4] 0.0797 - 0.0797 == 6.73e-08
     [5] 0.9816 - 0.9816 == -2.77e-08
     [6] 0.6042 - 0.6042 == -4.85e-08
     [7] 1.7051 - 1.7051 == -8.24e-08
     [10] 3.7536 - 3.7536 == -3.70e-08
     [11] 0.0256 - 0.0256 == 2.07e-08
     [12] 2.3972 - 2.3972 == -4.53e-08
     ...
    
     -- 2. Failure: omega chol (@test-omega-chol.R#15) -----------------------------
     v$omegaInv not equal to solve(mcov).
     64/64 mismatches (average diff: 0.126)
     [1] 8488 - 8488 == -0.000146
     [2] -173984 - -173984 == 0.002993
     [3] 423384 - 423384 == -0.007282
     [4] 294905 - 294905 == -0.005072
     [5] 372365 - 372365 == -0.006405
     [6] -168697 - -168697 == 0.002902
     [7] -223887 - -223887 == 0.003851
     [8] -331030 - -331030 == 0.005694
     [9] -173984 - -173984 == 0.002993
     ...
    
     -- 3. Failure: omega chol (@test-omega-chol.R#17) -----------------------------
     v$chol.omega not equal to chol(mcov).
     18/64 mismatches (average diff: 4.52e-08)
     [17] 0.9012 - 0.9012 == -3.04e-08
     [19] 2.5873 - 2.5873 == -9.79e-08
     [25] 0.0313 - 0.0313 == 2.65e-08
     [26] 1.2383 - 1.2383 == -1.69e-08
     [27] -2.1072 - -2.1072 == 7.07e-08
     [35] -0.7690 - -0.7690 == 8.82e-08
     [37] 2.4351 - 2.4351 == -4.89e-08
     [41] 0.2372 - 0.2372 == -1.83e-08
     [43] -0.1493 - -0.1493 == 5.70e-08
     ...
    
     -- 4. Failure: omega chol (@test-omega-chol.R#18) -----------------------------
     v$log.det.OMGAinv.5 not equal to 0.5 * log(det(solve(mcov))).
     1/1 mismatches
     [1] 2.87 - 2.87 == 6.67e-08
    
     == testthat results ===========================================================
     OK: 210 SKIPPED: 0 WARNINGS: 0 FAILED: 4
     1. Failure: omega chol (@test-omega-chol.R#14)
     2. Failure: omega chol (@test-omega-chol.R#15)
     3. Failure: omega chol (@test-omega-chol.R#17)
     4. Failure: omega chol (@test-omega-chol.R#18)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-devel-linux-x86_64-debian-clang

Version: 0.8.0-9
Check: installed package size
Result: NOTE
     installed size is 14.0Mb
     sub-directories of 1Mb or more:
     doc 1.6Mb
     libs 11.5Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.8.0-9
Check: dependencies in R code
Result: NOTE
    Namespace in Imports field not imported from: ‘n1qn1’
     All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86, r-release-osx-x86_64, r-oldrel-osx-x86_64

Version: 0.8.0-9
Check: use of PKG_*FLAGS in Makefiles
Result: NOTE
     PKG_FCFLAGS set in ‘src/Makevars’ without any corresponding files
     PKG_FCFLAGS set in ‘src/Makevars.in’ without any corresponding files
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 0.8.0-9
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: 'SnakeCharmR'
Flavors: r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.8.0-9
Check: whether package can be installed
Result: NOTE
    Found the following notes/warnings:
     Non-staged installation was used
Flavors: r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64